Stewart's defense of his own politics is that he is first and foremost a comedian. His program is on Comedy Central and was contracted to make audiences laugh not think.
The Daily Show is definitely not real journalism or punditry and it's dangerous to consider it such. However, when compared to the paltry state of popular news media today, The Daily Show genuinely holds up by using a simple model of practiced journalism: compare and contrast.
The Daily Show most holds up alongside 'real' journalism when it exposes both media and politics as constantly shifting and unstable platforms for truth. 'Look at what this politician says here. Now look what he says 5 months later.' By pigeon-holing himself into a strict corner of comedy Stewart wonderfully avoids the hypocrisy that beleagues traditional forms of journalism and politics. Accordingly, Stewart's power (different I think from Colbert's) is his ability to disengage his audience from their faith in his subject matter (politics/media).
I think Emma is correct in saying Stewart preaches to the converted in that his audience is mostly young and liberal. However, I do not think this is what prevents Stewart from being genuinely powerful among his demographic, moreso I think it is that his coverage alienates his audience from politics and government and media without providing an alternative except laughter. Of course, laughter is good enough by itself, but when Stewart goes so far as to lead a Washington D.C. rally during election season, he should have had the gall to attach a better political message to it than "Beck is an idiot. If he can do it so can I."
Were Stewart to have a go at harnessing his own power he would need to make a claim. As of now, his show is mostly passive. It's most exciting to watch when he takes on face-to-face right wingers and throws hypocrisy from across the table. But to do that full-time is probably something he isn't interested in, knowing full-well that laughing at your own stance is harder than picking apart other people's.